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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THYM cis rs9815354 1 rs9875083 chr3:41775786 ULK4 chr3:41288091-42003660:- 0.98 9.44 2.56E-15 Diastolic blood pressure
THYM cis rs9815354 1 rs9875107 chr3:41822313 ULK4 chr3:41288091-42003660:- 1 10.63 7.58E-18 Diastolic blood pressure
THYM cis rs10935120 1 rs9876658 chr3:134179453 ANAPC13 chr3:134196547-134204865:- -0.53 -7.23 1.19E-10 Height
THYM cis rs10935120 1 rs9876658 chr3:134179453 CEP63 chr3:134204575-134293852:+ -0.39 -5.73 1.17E-7 Height
THYM cis rs9876781 1 rs9876781 chr3:48487338 TREX1 chr3:48501186-48509043:+ -0.29 -4.28 4.47E-5 Longevity
THYM cis rs9815354 1 rs9876960 chr3:41985812 ULK4 chr3:41288091-42003660:- -1.01 -11.41 1.64E-19 Diastolic blood pressure
THYM cis rs9879311 1 rs9879311 chr3:10415343 GHRLOS chr3:10322637-10335132:+ 0.4 4.2 6.0E-5 Schizophrenia
THYM cis rs9876781 1 rs9881491 chr3:48487911 TREX1 chr3:48501186-48509043:+ -0.28 -4.22 5.51E-5 Longevity
THYM cis rs9815354 1 rs9882329 chr3:41767154 ULK4 chr3:41288091-42003660:- 1.03 11.59 7.14E-20 Diastolic blood pressure
THYM cis rs10935120 1 rs9883753 chr3:134247231 ANAPC13 chr3:134196547-134204865:- 0.56 7.61 1.94E-11 Height
THYM cis rs10935120 1 rs9883753 chr3:134247231 CEP63 chr3:134204575-134293852:+ 0.41 6 3.54E-8 Height
THYM cis rs9876781 1 rs9883759 chr3:48463618 TREX1 chr3:48501186-48509043:+ -0.28 -4.23 5.28E-5 Longevity
THYM cis rs9876781 1 rs9883927 chr3:48463711 TREX1 chr3:48501186-48509043:+ -0.29 -4.26 4.8E-5 Longevity
THYM cis rs10935120 1 rs9884031 chr3:134256500 ANAPC13 chr3:134196547-134204865:- 0.58 8.01 2.88E-12 Height
THYM cis rs10935120 1 rs9884031 chr3:134256500 CEP63 chr3:134204575-134293852:+ 0.41 6.04 2.93E-8 Height